Foivos Gypas (fgypas)

fgypas

Geek Repo

Company:Bioinformatics Software Engineer at Novartis Institutes for BioMedical Research (NIBR)

Location:Basel

Home Page:https://www.gypas.com/

Twitter:@fgypas

Github PK Tool:Github PK Tool


Organizations
panoptes-organization
snakemake
zavolanlab

Foivos Gypas's repositories

atom

:atom: The hackable text editor

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panoptes

Monitor computational workflows in real time

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.vim

My Vim configuration files

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angry-pink-purse

Who knows what can you find inside?

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bioconda-recipes

Conda recipes for the bioconda channel.

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black

The uncompromising Python code formatter

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cryptopunks

Collectible 8-bit characters on the Ethereum blockchain.

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cwl-example-workflows

Example workflows written in CWL

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cwl-tes

cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.

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dash-bio

Open-source bioinformatics components for Dash

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Dockerfile_R_example

Example of dockerfile using R

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guppy3

guppy / heapy ported to Python3. It works for real!

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IGV-snapshot-automator

Script to automatically create and run IGV snapshot batchscripts

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mirzag_cwl_docker

Docker image for MIRZAG with CWL

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MultiMarkdown

Expanded perl version of John Gruber's original Markdown --- No longer under active development since MMD 3

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omniCLIP

omniCLIP is a CLIP-Seq peak caller

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Sketches-with-Python

This Python Script converts an image into a sktech, made using OpenCV.

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snakemake

This is the development home of the workflow management system Snakemake. For general information, see

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snakemake-workflow-template

A cookiecutter template for a snakemake-workflow readme file

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staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

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tectool_docker

TECtool with docker

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Whippet.jl

Lightweight and Fast; RNA-seq quantification at the event-level

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zarp

Zavolan-Lab Automated RNA-Seq Pipeline

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