fethalen

Patchwork

Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data

better_fasta_grep

A Grep-like tool for retrieving matching sequence records from a FASTA file.

phylopypruner

Tree-based orthology inference with functionality for reducing contamination

orthoquoll

A stand-alone tool for evaluating simple statistics of orthologs

bioconda-recipes

Conda recipes for the bioconda channel.

containers

Bioinformatics containers

fethalen

About me

Papaya

A Visual Studio Code port of HenryNewcomer's Vim theme

SeqExchange

Simulate cross-contamination and a high paralogy count in sequence data

symbiontDivider

An easy to use pipeline to separate endosymbiont genomes from their host's

trimming