felipelouza

coding-interview-university

A complete computer science study plan to become a software engineer.

the-art-of-command-line

Master the command line, in one page

ciencia-da-computacao

🎓 Um caminho para a educação autodidata em Ciência da Computação!

ggplot2

An implementation of the Grammar of Graphics in R

llm-numbers

Numbers every LLM developer should know

tcs

Book in preparation: introduction to theoretical computer science

data_compression_course

A Crash Course on Data Compression.

libbsc

High performance block-sorting data compression library

CompetitiveProgramming

Page of the course "Competitive Programming and Contests" at Department of Computer Science, University of Pisa

Spring

FASTQ compression

memusg

A 'time'-like utility for Unix that measures peak memory usage

colord

A versatile compressor of third generation sequencing reads.

fulgor

Fulgor is a fast and space-efficient colored de Bruijn graph index.

grlBWT

Efficient construction of the BWT using string compression

kff-tools

lzd

LZ Double factor Factorization.

ShapedSlp

SLP encodings that support substring extraction

optimalBWT

A tool for computing the optimalBWT of string collections

bwsd

Algorithms to compute the Burrows-Wheeler Similarity Distributions [SPIRE'18, TCS 2019]

faster-graph-bisection

phyBWT2

Inferring phylogeny by using BWT without pairwise distances

IUPACpal

Tool to Locate Inverted Repeats in DNA Strings

PFP_LZ77

kfinger

A pipeline for computing overlaps between long reads based on theoretical properties of Lyndon factorizations.

longestlyndonsubsequence

Computes the longest Lyndon subsequence of a given input

msa

cais

cais: A tool for computing several BWT varians using the conjugate array induced sorting algorithm.

figiss

Recursive-RePair

File compression using Recursive PFP + RePair

tucoffee