hong.fei's repositories
cfDNA
Analysis of epigenetic signals captured by fragmentation patterns of cell-free DNA
cgpBattenberg
Battenberg algorithm and associated implementation script
chinese-poetry
The most comprehensive database of Chinese poetry 🧶最全中华古诗词数据库, 唐宋两朝近一万四千古诗人, 接近5.5万首唐诗加26万宋诗. 两宋时期1564位词人，21050首词。
conta
Conta is an R package to detect cross contamination and source of contamination
Coursera-ML-AndrewNg-Notes
吴恩达老师的机器学习课程个人笔记
deeplearningbook-chinese
Deep Learning Book Chinese Translation
diamond
Accelerated BLAST compatible local sequence aligner.
dndscv
dN/dS methods to quantify selection in cancer and somatic evolution
gatk
Official code repository for GATK versions 4 and up
htslib
C library for high-throughput sequencing data formats
Jellyfish
A fast multi-threaded k-mer counter
KMC
Fast and frugal disk based k-mer counter
kneaddata
Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.
kraken2
The second version of the Kraken taxonomic sequence classification system
Krona
Interactively explore metagenomes and more from a web browser.
linux_learn
linux_learn
Machine-Learning-for-High-Risk-Applications-Book
Official code repo for the O'Reilly Book - Machine Learning for High-Risk Applications
ML-NLP
此项目是机器学习(Machine Learning)、深度学习(Deep Learning)、NLP面试中常考到的知识点和代码实现，也是作为一个算法工程师必会的理论基础知识。
mtranslate
A simple api for google translate
mykrobe
Antibiotic resistance prediction in minutes
NGS-analysis
二代测序数据分析
prophyle
Accurate, resource-frugal and deterministic DNA sequence classifier.
SNPGenie
Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data
TianYan
很多年前，天涯社区曾出现了不少深受欢迎的帖子，成功地预言了许多形势和事件。这些帖子因此被冠以“天涯神贴”之名。遗憾的是，由于各种原因，天涯论坛目前已经无法打开。幸运的是，有人收集了这些帖子，并将它们整理为一份完整的合集。