fdlk / molgenis-app-lifecycle

App for the LifeCycle catalogue

molgenis-app-lifecycle

A variable catalogue to explain which variables are used to do harmonised research

Setup

git clone [e-mail]:molgenis/molgenis-app-lifecycle.git
cd molgenis-app-lifecycle
yarn
# Update proxy-settings if needed; the default should be fine for development
cp .lifecyclerc.example .lifecyclerc
yarn dev
# Goto http://localhost:8080/login to create a session cookie

Configuring Molgenis

Upload the data

You can upload the LifeCycle test data into MOLGENIS and start the app. You need to make sure the tables called in the action.js. Are also present in the MOLGENIS instance.

Test with a running MOLGENIS instance

For local testing with a running MOLGENIS instance you have to alter the config of the app. Comment in the following block:

config/index.js

module.exports = {
  dev: {

    // Paths
    assetsSubDirectory: 'static',
    assetsPublicPath: '/',
    // Beginning of block
    proxyTable: {
      '/login': {
        target: 'http://localhost:8080'
      },
      '/api': {
        target: 'http://localhost:8080'
      }
    },
    // End of block

Comment out this block in the same file.

/**
 * GET and POST interceptors
 * Removes the need for a running backend during development
 */
No mock data available

That is it. Run a molgenis instance on localhost:8080 and start the core variable catalogue with:

yarn dev

Build your MOLGENIS app

Create a working application that can be imported in MOLGENIS directly by executing:

yarn build

You can add your app to a MOLGENIS instance from this location: dist/molgenis-app-lifecycle.zip.