fdchevalier

filezilla-tunnel

SWAMP

Biomphalaria-organ-microbiomes

chromium-ssh

Create a SSH tunnel and start chromium

jupyter-tunnel

msg

Multiplexed Shotgun Genotyping

myscreen

Reattach screen session using a numbered list

Old-World-SmSULT-OR-variation

This is the code used to analyze SmSULT-OR variants from sequencing of schistosome exomes.

plot.matrix

Visualizes a matrix object plainly as heatmap. It provides a single S3 function plot for matrices.

poppr

🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction

publish-fq

Publish fastq files generated by bcl2fastq the "old Casava way" (by samples or by projects)

PZQ-R_DNA-seq

PZQ-R_field_variants

PZQ-R_RNA-seq

selectionTools

Pipeline to take VCF through to Selection Analysis.

Sm-GFF-HHPred-table

snakemake

This is the development home of the workflow management system Snakemake. For general information, see

startmrca

An R package to estimate the timing of selection for a beneficial allele.

Biomphalaria-hemolymph-microbiome

bioproject-dl

Cercarial-production

conda-recipes

fdchevalier

functional_analysis

Functional analysis of genetic mutations

glmmTMB

glmmTMB

Sm_gene_expression

Schistosoma mansoni gene expresion at different stages

styles

Official repository for Citation Style Language (CSL) citation styles.