Francesco Beghini's repositories
bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell000
biom-format
The Biological Observation Matrix (BIOM) Format Project
Language:PythonNOASSERTION000
CRC_metaanalysis_metaphlan3
Meta-analysis of CRC datasets with MetaPhlAn + HUMAnN 3.0
curatedMetagenomicsNextflow
Curated Metagenomics Data Nextflow workflows
Language:Nextflow000
docker_profiling_tools
Stefans Collection of Dockerfiles and helper scripts for profiling tools
fbeghini.github.io
🎓 Hugo Academic Theme 创建一个学术网站. Easily create a beautiful academic résumé or educational website using Hugo, GitHub, and Netlify.
Language:TeXMIT000
humann
HUMAnN 2.0 is the next generation of HUMAnN 1.0 (HMP Unified Metabolic Analysis Network).
Language:PythonNOASSERTION000
Language:R000
glimpse_pipeline
Pipeline for variant imputation using GLIMPSE
Language:NextflowMIT000
Language:Shell000
rstudio-server-conda
Run Rstudio Server in an anaconda environment
Language:ShellMIT000
sourmash
Quickly search, compare, and analyze genomic and metagenomic data sets.
Language:PythonNOASSERTION000
workflow-template-nextflow
Template for building a small workflow in Nextflow
MIT000