fanninpm's repositories

algorithm-archive

A collaborative book on algorithms

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augur

Pipeline components for real-time phylodynamic analysis

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RustPython

A Python Interpreter written in Rust

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beancount

Rust tooling surrounding beancount, a text-based double-entry bookkeeping language.

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bioconda-recipes

Conda recipes for the bioconda channel.

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Cecret

Nextflow workflow for our analysis of SARS-COV-2

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colosseum

An implementation of the CSS layout algorithm.

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cutechess

Cute Chess is a graphical user interface, command-line interface and a library for playing chess.

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dark-github

Dark mode implementation for GitHub with many customizable options.

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docker-builds

:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics

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docker_images

Docker images

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GitHub-Dark

:octocat: Dark GitHub style

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glacier

A big 'ol pile of ICE.

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homebrew-cask

🍻 A CLI workflow for the administration of macOS applications distributed as binaries

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homebrew-cask-fonts

🖋 Casks of F🅾𝓝𝐓𝚂

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homebrew-core

🍻 Default formulae for the missing package manager for macOS

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honkit

:book: HonKit is building beautiful books using Markdown - Fork of GitBook

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mad_river_wf

SARS-CoV-2 analysis workflow, using Nextflow and bbtools

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MutopiaProject

Open source sheet music

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ncov

Nextstrain build for novel coronavirus SARS-CoV-2

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pangolin

Software package for assigning SARS-CoV-2 genome sequences to global lineages.

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petgraph

Graph data structure library for Rust.

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py-spy

Sampling profiler for Python programs

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rcfbpoll

the /r/CFB Poll site

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rexpat

Rust ❤️ Expat library

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rustlings

:crab: Small exercises to get you used to reading and writing Rust code!

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staphb_toolkit

Python Toolkit for using containerized programs in either Singularity or Docker

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treetime

Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction

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xopen

Open compressed files in Python

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