Fabrice Cordelières's repositories
Training_material
Some of my training materials
IJ-Plugin_KymoToolBox
KymoToolBox is an ImageJ plugin dedicated to construction and analysis of kymographs
IJ-Plugin_JACoP
Just Another Colocalisation Plugin
IJ-Plugin_PALM_Zeiss_workflow
An ImageJ workflow for semi-automated laser microdissection using Zeiss PALM system
Arduino_Light_Source_Switch
This repository contains all the informations about the design of an automated light source switch for microscopy
IJ-Manual_Tracking
This ImageJ plugin is aimed at tracking simple object, in 2D and/or 3D.
IJ-Plugin_Metamorph-Companion
This plugin is dedicated to handling in ImageJ data from/destined to the Metamorph software
IJ-Toolset_SynaptosomesMacro
This toolset is aimed at quantifying the proteins' proximity and their recruitment on synaptosomes, on a structure per structure basis.
3D-print_NEUBIAS2020_Stand
The 3D stand made for the NEUBIAS 2020 conference @ Bordeaux
Arduino_Laser_Projection_Microscope
This repository contains all the informations about the design of a motorized laser projection microscope.
IJ-Macro_FRAP-MM
This macro is aimed at basic data extraction/normalisation from FRAP datasets acquired using the Metamorph software
IJ-Plugin_3D_object_counter
This ImageJ plugin provides a way to individualize and caracterize 3D objects from a stack.
IJ-Plugin_Analyze-Particles-ColorMap
This ImageJ plugin is aimed at providing a way to easily get a visual map of parameters extracted from the ImageJ "Analyze Particles" function.
IJ-Plugin_DTC
Detect, Track, Colocalize
IJ-Plugin_LiveFeed_Simulator
This ImageJ plugin aims at simulating software the would push images at regular time interval into ImageJ
IJ-Plugin_Zip-It
This plugin is aimed at providing a way to easily create a Zip file from a folder from ImageJ macros
IJ-Toolset_OligoMacro
Caraterisation of oligodendrocytes processes
MiMB2018
This repository contains the two macros detailed in MiMB2019
Python_Zen-CD7-SandBox
This repository is meant to accomodate some experimentations about Zeiss Zen/CD7 connectivity with Python
PyTorch-Course
PyTorch Course