exhorder / ngs

NGS Language Bindings

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ngs

NGS Language Bindings

NGS is a new, domain-specific API for accessing reads, alignments and pileups produced from Next Generation Sequencing. The API itself is independent from any particular back-end implementation, and supports use of multiple back-ends simultaneously. It also provides a library for building new back-end "engines". The engine for accessing SRA data is contained within the sister repository ncbi-vdb.

The API is currently expressed in C++, Java and Python languages. The design makes it possible to maintain a high degree of similarity between the code in one language and code in another - especially between C++ and Java.

Documentation

Further documentation is available on the wiki.

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NGS Language Bindings

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Languages

Language:C++ 49.3%Language:Perl 20.9%Language:Java 16.7%Language:Python 6.6%Language:C 3.3%Language:Makefile 2.3%Language:Shell 0.8%