ewels / lightweight-template

A minimal Nextflow pipeline that works with @nf-core modules.

nf-core/lightweight-template

Pipeline summary

1. Read QC (FastQC)
2. Present QC for raw reads (MultiQC)

Credits

nf-core/lightweight-template uses DSL2 modules from the nf-core community.

You can cite the nf-core publication as follows:

The nf-core framework for community-curated bioinformatics pipelines.

Philip Ewels, Alexander Peltzer, Sven Fillinger, Harshil Patel, Johannes Alneberg, Andreas Wilm, Maxime Ulysse Garcia, Paolo Di Tommaso & Sven Nahnsen.

Nat Biotechnol. 2020 Feb 13. doi: 10.1038/s41587-020-0439-x.