Gytis Dudas's repositories

baltic

baltic - backronymed adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. Development is back on the evogytis/baltic branch (i.e. here).

Language:PythonLicense:GPL-3.0Stargazers:93Issues:10Issues:26

B.1.620-in-Europe

Data and code used to generate figures to describe SARS-CoV-2 VOI lineage B.1.620 in Europe/Lithuania.

Language:Jupyter NotebookLicense:MITStargazers:11Issues:2Issues:2

MERS_recombination

Does MERS-CoV recombine?

ebolaGuinea2014

Phylogenetic analysis of 2014 Ebolavirus outbreak in Guinea.

fluB

Investigating the (co)evolution of reassorting influenza B lineages.

orthomyxo-metagenomics

Insights into orthomyxovirus evolution from accumulated metagenomic datasets

Language:Jupyter NotebookLicense:AGPL-3.0Stargazers:3Issues:0Issues:0

LogFixer

LogFixer is a simple Python script that corrects BEAST output files with missing states or values.

author_order

Given a file with author names and their semicolon-separated affiliations separated by a tab this script will produce an ordered list of the authors with their affiliations numbered, followed by the affiliation order.

crisp_colours

Also known as chips in strange countries. A global standard for crisp/chip packaging colours.

Language:Jupyter NotebookStargazers:1Issues:0Issues:0

evogytis.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

Language:JavaScriptLicense:MITStargazers:1Issues:0Issues:0

ShMDb

Shitey movie database. A place where I'm storing all the bad ("shitey", pronounced shy-tee) films I or people associated with me have shown.

Language:Jupyter NotebookStargazers:1Issues:1Issues:0

blotter

bedford lab research

Stargazers:0Issues:0Issues:0
Language:Jupyter NotebookLicense:GPL-3.0Stargazers:0Issues:1Issues:1
Language:Jupyter NotebookStargazers:0Issues:3Issues:0
Language:Jupyter NotebookStargazers:0Issues:0Issues:0
Stargazers:0Issues:1Issues:0