eskutkaan

Kaan Ihsan Eskut's repositories

Open source code for AlphaFold.

Language:PythonApache-2.0000

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

Language:CGPL-3.0000

Copy number variant detection from targeted DNA sequencing

Language:PythonNOASSERTION000

A genome completeness evaluation tool based on miniprot

Language:PythonApache-2.0000

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Language:PythonBSD-3-Clause000

Config files for my GitHub profile.

000

a blog hosted on GitHub Pages

Language:CSSNOASSERTION000

Lightning-fast and Powerful Code Editor written in Rust

Language:RustApache-2.0000

A versatile pairwise aligner for genomic and spliced nucleotide sequences

Language:CNOASSERTION000

a short snakemake workflow to analyze bulk RNAseq data

Language:Python010

Tools (written in C using htslib) for manipulating next-generation sequencing data

Language:CNOASSERTION000

The TRate program computes "rate" of each transcript according to given coverage file.

Language:C++MIT000

a work-in-progress k-mer counter written in Rust

Language:Rust000