Erol Kavvas's repositories
microbial_AMR_ML
Code repository for machine learning and computational analysis of large-scale microbial genomics data (https://rdcu.be/9rHj)
metabolic-allele-classifiers
A flux balance analysis machine learning classifier for microbial GWAS
iEK1011_materials
Repository for updated and standardized model of Mycobacterium tuberculosis H37Rv, iEK1011 (and the BiGGs quality iEK1008 model)
cobrascape
constraint-based modeling for allelic variation (COBRA for fitness landSCAPEs)
diet_recommendation
Diet recommendation via gut metabolic modeling
tb_pangenome_workflow
Reproducible workflow for analyzing the pan-genome of 1595 M. Tuberculosis strains
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