EPI2ME Labs

EPI2ME Labs's repositories

wf-human-variation

Language:NextflowNOASSERTION91 13 197

wf-single-cell

Language:PythonNOASSERTION64 7 120

wf-transcriptomes

Language:PythonNOASSERTION64 7 99

pychopper

cDNA read preprocessing

Language:PythonNOASSERTION46 3 60

wf-metagenomics

Metagenomic classification of long-read sequencing data

Language:NextflowNOASSERTION46 6 115

modbam2bed

Language:CNOASSERTION44 3 68

wf-artic

ARTIC SARS-CoV-2 workflow and reporting

Language:GroovyNOASSERTION43 11 100

fastcat

Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.

Language:CNOASSERTION29 2 6

wf-basecalling

Language:NextflowNOASSERTION28 5 41

wf-pore-c

Language:NextflowNOASSERTION27 5 62

wf-clone-validation

Language:NextflowNOASSERTION23 8 50

wf-alignment

Language:NextflowNOASSERTION21 3 31

kraken2-server

Kraken2 Server

Language:C++NOASSERTION20 2 4

wf-bacterial-genomes

Small variant calling for haploid samples

Language:PythonNOASSERTION20 4 38

ezcharts

Language:PythonNOASSERTION17 3 2

wf-amplicon

Language:NextflowNOASSERTION17 4 18

wf-16s

Language:NextflowNOASSERTION16 2 17

wf-flu

Language:NextflowNOASSERTION14 2 8

wf-template

Nextflow workflow template repository

Language:NextflowNOASSERTION14 3 2

pore-c-py

Language:PythonNOASSERTION11 3 7

wf-somatic-variation

Language:NextflowNOASSERTION10 5 31

epi2me-labs.github.io

Language:HTML7 50

wf-cas9

Language:GroovyNOASSERTION4 2 5

wf-aav-qc

Language:PythonNOASSERTION3 2 5

wf-mpx

Language:NextflowNOASSERTION2 4 3

wf-tb-amr

Language:PythonNOASSERTION1 30

bed-bugs

bed-bugs website

Language:JavaScript020

ont-spectre

Language:PythonNOASSERTION020

wf-hereditary-cancer

Language:NextflowNOASSERTION000

wf-installation-qualification

Language:PythonNOASSERTION020