emvolz

treedater

Scalable relaxed clock phylogenetic dating

rclustnet

Generate a random graph with desired size, clustering coefficient, and degree distribution

cogukRutils

nigeria_hiv_model

nyflu-skyline

Bayesian skyline and skyride analysis for human influenza virus in New York

phydynbeast

Configure BEAST PhyDyn analyses

treedater-earlySL

treedater algorithm applied to early Sierra Leone EBOV sequences

weifang-sarscov2

kickstart.nvim

A launch point for your personal nvim configuration

learn

RECON learn: a free, open platform for training material on epidemics analysis

lineageApp

mlesky-testing

ncov

Nextstrain build for novel coronavirus (nCoV)

Nvim-R

Vim plugin to work with R

PhyDyn-simulations

phydynR.r0.1.2

Coalescent simulation and likelihood for phylodynamic inference

polecat

reconhub.github.io

Official website for RECON - The R Epidemics CONsortium

sequencing_coverage

skygrowth-experiments

Analyses & simulations in support of skygrowth

starter

Starter template for LazyVim

treedater_test