emilyasterjones / sglxarray

Utilities for loading SpikeGLX data in xarray format.

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SGLX + xarray

This package is no longer maintained here, and has been moved to ecephys.sglxr

Simple tools for loading SpikeGLX data, including useful metadata, as xarray objects.
In use at the Center for Sleep and Consciousness (CSC-UW).
Tested with Neuropixel 1.0 probes only.

Basic usage

Loading binary data

QuickStart
See example usage for more details.
I do have functions for loading digital channels recorded with Multifunction I/O cards, let me know if you need me to integrate them urgently.

ImecMap objects

IMRO and CMP are parsed from the binary file's metadata by default and loaded as an attribute in the returned xarray object. There are also other utilities for loading these tables without binary data.
ImecMap
See example usage for more details.

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Utilities for loading SpikeGLX data in xarray format.


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