Emiel van Loon's repositories
amoter
R tools analyse animal movement over terrain
chifo
Home of the code and documentation of a chimpanzee foraging model.
data-large-scale-muskrat-control-experiment
Data set used in the publication 'A Large-Scale Experiment to Evaluate the Effects of Trapping to Control Muskrats (Ondatra zibethicus) in The Netherlands' by Daan Bos, Emiel van Loon, Erik Klop and Ron Ydenberg (accepted for publication in Wildlife Society Bulletin in 2020).
eda
Exploratory Data Analysis in R
FirstSteps
First exercise for students to get familiar with collaboratively editing data
license-templates
Templates for open source and other licenses
markdown
a short markdown tutorial for novices
mica
Scripts and data for the Life MICA project. Life MICA is an EU-supported international cooperation which aims to reduce the size of coypu and muskrat populations to prevent damage to waterways and native biodiversity. More info is available at https://lifemica.nl/
model_development_template
a folder structure suitable for collaborative scientific model development on github
model_output_discussion
this is an example folder to get you started with creating your own HTML-file where you discuss your model output
modules
modules for each component of an SDM workflow, for use with the zoon R package
pullBBS
An R package for downloading species abundance data from the North American Breeding Bird Survey ftp server.
rbasics-book
An introduction to R, RStudio, and RMarkdown created with GitHub pages and bookdown package
Revl
miscellaneous r codes
rmarkdown-book
R Markdown: The Definitive Guide (published by Chapman & Hall/CRC in July 2018)
RP016
Reproduction Package accompanying paper by Salvatori et al. 2022 (Euromammals paper number 016)
simple_html_and_markdown_guide
This is a simple and practical overview of html and (equivalent) markdown tags.
sponge_hypergravity
Analysis report with the data and statistical analyses of an experiment on sponge growth under hypergravity by Martijn Bart and others. The html-version of the report can be viewed here:
studyGroup
Gather together a group to skill-share, co-work, and create community
template_for_model_development
a template with folder structure suitable for collaborative scientific model development on github
tmp
temp
tui.editor
🍞📝 Markdown WYSIWYG Editor. GFM Standard + Chart & UML Extensible.
zoon
The zoon R package
zoon_app_paper
A reproducible manuscript describing the zoon R package