epvclust
##About "epvclust" is an optimized version of R "pvclust" package (http://www.sigmath.es.osaka-u.ac.jp/shimo-lab/prog/pvclust). It performs the same work of pvclust for assessing the uncertainty in hierarchical cluster analysis, but with better performance (mostly on time performance).
It's available an offline installable R package. It's also available the C code for doing multiscale bootstrap.
##About Pvclust
- [Official page] (http://www.sigmath.es.osaka-u.ac.jp/shimo-lab/prog/pvclust/)
- [Theory about multiscale bootstrap] (http://www.is.titech.ac.jp/~shimo/multiboot.html)
##Contents
R
This folder contains the R epvclust package. To install it execute the file "install.R" with RStudio ("Devtools" R package is a required dependency).
"install.R" contains also a runnable example.
C
This folder contains the C code for computing multiscale bootstrap. Main file: "pvclust.c".
exampleData
This folder contains several datasets of different sizes.
Authors
Emanuele Pesce - [University of Salerno] (http://www.unisa.it)
For any suggestions or contributions do not hesitate to contact me.