Update adaptive filter to be capabale of filtering based on in-cell data
seichhorn opened this issue · comments
I was thinking it might be nice to allow users to run adaptive filter based on partitioned barcodes. The higher background in cells seems to result in a somewhat higher false-positive rate when considering only parsed barcodes. I was thinking the generate adaptive filter task could have a parameter that enables it to consider either all or just partitioned barcodes.