emanuega / MERlin

MERlin is an extensible analysis pipeline applied to decoding MERFISH data

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Update snakemake writer to ignore timestamps

emanuega opened this issue · comments

Sometimes when rerunning analysis that has been copied to a new location, snakemake will rerun all analysis since the timestamps are no longer in the correct order. Should we update the snakefile writer to ignore timestamps by adding the ancient tag (https://snakemake.readthedocs.io/en/stable/snakefiles/rules.html#ignoring-timestamps)?