David G Ellis (ellisdg)

ellisdg

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Location:University of Nebraska Medical Center

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David G Ellis's repositories

3DUnetCNN

Pytorch 3D U-Net Convolution Neural Network (CNN) designed for medical image segmentation

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frangi3d

Computes vesselness scores for 3-dimensional images.

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BIDSManager

Easily convert to, organize, and manage BIDS imaging data in Python

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HCPLifespan2BIDS

Convert HCP Lifespan, Aging, and Development data to BIDS format

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mri_reface_dockerfile

Dockerfile for building a Docker image for mri_reface

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ashs_docker

Automatic Segmentation of Hippocampal Subfields

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gradunwarp

Gradient Unwarping in Python

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hcp2bids

To convert Human Connectome projects(HCP) data to BIDS std

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HCPPipelinesDocker

A BIDS App for minimal preprocessing using the HCP Pipelines

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keras-resnet

Residual networks implementation using Keras-1.0 functional API

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nipype

Workflows and interfaces for neuroimaging packages

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text2nipype

Create nipype workflows from text descriptions.

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tumorprep-prereqs

Prerequisite software for tumorprep.

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