Eliezyer's repositories
KS2wrapper
Code to wrap neuroscope xml information to use kilosort in the binary files
preprocess-pipeline
Code for preprocessing data in brito-sjulson lab
analysis-tools
Code for analyzing data saved by the Open Ephys GUI
BehavioralAutomation
Codes developed for general use in arduino, mostly in automation of mazes and neuroscience behavior stuff.
buzcode
Code for internal lab sharing - polishing has started but is by no means complete
CURBD
Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)
DeepLabCut
Markerless tracking of user-defined features with deep learning
ember-osf-preprints
OSF Preprints: The open preprint repository network
RippleDetector
SPWRs Detecor for real time purpose
fieldtrip
The MATLAB toolbox for MEG, EEG and iEEG analysis
fritzing-app
Fritzing desktop application
gramm
Gramm is a complete data visualization toolbox for Matlab. It provides an easy to use and high-level interface to produce publication-quality plots of complex data with varied statistical visualizations. Gramm is inspired by R's ggplot2 library.
GUI
Software for electrophysiology data acquisition
KiloSort
GPU code for spike sorting
Kilosort2
Fast spike sorting with drift correction for up to a thousand channels
MatlabScripts
Matlab Scripts for electrophysiological analysis
npy-matlab
Experimental code to read/write NumPy .NPY files in MATLAB
phy
phy: interactive visualization and manual spike sorting of large-scale ephys data
plugin-GUI
Open Ephys GUI with plugin architecture
pynapple
PYthon Neural Analysis Package :pineapple:
ReAgent
A platform for Reasoning systems (Reinforcement Learning, Contextual Bandits, etc.)
RippleModel
Matlab function to generate a simple ripple model
SpikesDecisionActions
Trying to implement Wilson's book code in python
tensortools
Fitting and visualizing tensor decompositions in Python
TStoolbox
A Matlab Toolbox to analyze neuronal data