Ekkachai Danwanichakul's repositories
bioinformatics-pipeline-tutorial
A tutorial on how to create bioinformatics pipelines as bash scripts, Makefiles and using tools like Nextflow.
chipseq
ChIP-seq peak-calling, QC and differential analysis pipeline.
data-dockerfiles
a curated list of docker-compose files prepared for testing data engineering tools, databases and open source libraries.
data_science_neo4j_docker
Docker template for basic data science packages to interface with Neo4j
Deploy-NLP-Model-with-FastAPI
Learn how to build and deploy NLP model with FastAPI
ekka21.github.io
My personal blog
fastapi-celery
Example of how to handle background processes with FastAPI, Celery, and Docker
flask-react-spa
A production-ready boilerplate built with Python 3, Flask and ES6 React/Redux
mlflow-docker
Production ready docker-compose configuration for ML Flow with Mysql and Minio S3
nyt-news-labeler
Tag news stories based on models trained on the NYT corpus.
Python-Flask-Redis-Celery-Docker
Learn how to use Python with Flask Redis and Celery and pack everything into Docker Container
rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
s5cmd
Parallel S3 and local filesystem execution tool.
sagemaker-workshop-420
MLinProduction SageMaker workshop hosted in April 2020