Barış Ekim's repositories
arewebioyet.github.io
Rust in bioinformatics and computational biology
bioconda-recipes
Conda recipes for the bioconda channel.
dotfiles
configs for various tools
geosketch
Geometry-preserving random sampling
kmercamel
KmerCamel🐫 provides implementations of several algorithms for efficiently representing a set of k-mers as a masked superstring.
kmers
A bit-packed k-mer representation (and relevant utilities) for rust
livecode
A repository of readmes, techniques, notes and other materials about how i live code in SuperCollider. A (sorta) companion repository to co34pt_livecode
rouille
Rust programming, in French.
rust-debruijn
De Bruijn graphs in Rust
rust-parallelfastx
Parallel iteration of FASTA/FASTQ files, for when sequence order doesn't matter but speed does
rust-seq2kminmers
Iterate k-min-mers from a DNA sequence in Rust
seq
A high-performance, Pythonic language for bioinformatics
seq_io
FASTA and FASTQ parsing in Rust
sourmash
Quickly search, compare, and analyze genomic and metagenomic data sets.
wfa
Rust WFA and WFλ
www
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes