Eddie Imada's repositories
BiocUruguay2015
R / Bioconductor Training Material for Uruguay R Bio Course
bsseq
Devel repository for bsseq
cgpNgsQc
Collection of code for checking NSG sequencing results
dapars
DaPars(Dynamic analysis of Alternative PolyAdenylation from RNA-seq)
DaPars2
Dynamics analysis of Alternative PolyAdenylation from RNA-seq
datasharing
The Leek group guide to data sharing
ExData_Plotting1
Plotting Assignment 1 for Exploratory Data Analysis
fastqsplit
rapidly split gzipped fastq files on lane
httpgd
Asynchronous http server graphics device for R.
ncov
Nextstrain build for novel coronavirus SARS-CoV-2
polyApipe
polyApipe
ProgrammingAssignment2
Repository for Programming Assignment 2 for R Programming on Coursera
RepData_PeerAssessment1
Peer Assessment 1 for Reproducible Research
rna-seq-star-deseq2
RNA-seq workflow using STAR and DESeq2
robustbase
:exclamation: This is a read-only mirror of the CRAN R package repository. robustbase — Basic Robust Statistics. Homepage: http://robustbase.r-forge.r-project.org/
SandwichesWithSnakemake
This is a beginner's tutorial to Snakemake
slurm
Cookiecutter for snakemake slurm profile
spatial-inla
Repository containing the data for the Hierarchical modelling using INLA tutorial on the Coding Club website
TrimGalore
A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data