EcoHealth Alliance's repositories
awesome-parasite
A curated list of host-parasite information
container-template
Containerised R workflow template
amr-analysis
Global patterns and correlates in the emergence of antimicrobial resistance in humans
eha-ma-handbook
EcoHealth Alliance Modeling & Analytics Handbook
amphibian_trade
Documenting amphibian trade into the United States
containerTemplateUtils
A set of utility functions for working with the container-template-repo template
ecohealthalliance.r-universe.dev
An R-Universe for EcoHealth Alliance Packages
eh-server-workflow-run
Outlines how you can run various analytic workflows on EHA infrastructure
targets-mermaid-test
Test for Target Version and Mermaid Rendering Issues
WABNet-spatial
Code used to produce figures in final report for WABNet project
gheri_eucom
Repo for FY'19 GHERI EUCOM project mapping ecological factors that my play a role in EID emergence and spread
bat_viral_detection_reproduction
Investigating reproductive effects on viral detection in bats
building-blocks-of-reproducibility
A series of presentations on creating reproducible workflows
ehallm
What the Package Does (Title Case)
ehaproj
Package for EHA project templates and workflow support
mclustAddonsEHA
A customized fork of mclustAddons
mclustEHA
A Customized Fork of mclust
module-system-llama
Setting access for user to run llama.cpp models for their work as a module system
open-rvfcast
Wellcome Open RVFCast project repository
RPostgres
Temporary fork for testing Dolt/Doltgres compatibility
RVF_SIR_Model
Repository of code to simulate 34-years of RVFV transmission at a single pan in central South Africa.
sabrenet-rousettus-dynamics
Viral maintenance and excretion dynamics of coronaviruses within an Egyptian rousette fruit bat maternal colony – considerations for spillover
slurm-containerized-hpc-environment
The goal of this project is to outline the strategies for integrating Simple Linux Utility for Resource Management(SLURM) into our existing High-Performance Computing(HPC) platform.