Ebrahim Ebrahim's repositories
deep-atlas
An exploration of the DeepAtlas registration and segmentation methodology
holoscan-sandbox
messing around with holoscan-sdk
lungair-monailabel-app
(WIP) MONAILabel app to support lung segmentation component of LungAIR
client-py
Python SMART on FHIR client
cookie
Scientific Python Library Development Guide and Cookiecutter
dipy
DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.
habet
HArmonization BEnchmarking Tool
joplin-populate-agenda-headings
joplin plugin to populate date headings to set up an agenda for the week
lung-seg-exploration
An exploration of techniques for segmenting lungs in chest x-rays.
lungair-desktop-application
Desktop app for AI-based BPD risk analysis
markdown-github-bear-toc
Autogenerated Table of Contents for Github Markdown or Bear Notes
MONAI
AI Toolkit for Healthcare Imaging
OpenLIFU-python
focused ultrasound toolbox
smart-on-fhir-tutorial
SMART on FHIR developer tutorial
tutorials
MONAI Tutorials
vsvf-monai
Experimentation with ways of integrating the fluid-based registration technique vSVF into MONAI.
vtk-js
Visualization Toolkit for the Web