Ebrahim Ebrahim (ebrahimebrahim)

ebrahimebrahim

Geek Repo

Company:Kitware

Location:Chapel Hill, NC

Home Page:https://ebrahim.peup.world/

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Organizations
brain-microstructure-exploration-tools

Ebrahim Ebrahim's repositories

deep-atlas

An exploration of the DeepAtlas registration and segmentation methodology

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peupfudge

A tabletop RPG system.

holoscan-sandbox

messing around with holoscan-sdk

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ITK

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

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lungair-monailabel-app

(WIP) MONAILabel app to support lung segmentation component of LungAIR

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Slicer

Multi-platform, free open source software for visualization and image computing.

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client-py

Python SMART on FHIR client

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cookie

Scientific Python Library Development Guide and Cookiecutter

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CTK

A set of common support code for medical imaging, surgical navigation, and related purposes.

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dipy

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

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easyreg

an image registration/augmentation/segmentation package

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habet

HArmonization BEnchmarking Tool

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joplin-populate-agenda-headings

joplin plugin to populate date headings to set up an agenda for the week

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lung-seg-exploration

An exploration of techniques for segmenting lungs in chest x-rays.

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lungair-desktop-application

Desktop app for AI-based BPD risk analysis

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markdown-github-bear-toc

Autogenerated Table of Contents for Github Markdown or Bear Notes

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mermaid

Image registration using pytorch

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MONAI

AI Toolkit for Healthcare Imaging

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mop

R Package for Multiscale Optimal Transport

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OpenLIFU-python

focused ultrasound toolbox

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smart-on-fhir-tutorial

SMART on FHIR developer tutorial

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tutorials

MONAI Tutorials

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UTM

Optimal transport based population analysis

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vsvf-monai

Experimentation with ways of integrating the fluid-based registration technique vSVF into MONAI.

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vtk-js

Visualization Toolkit for the Web

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