dzjin(金德智)'s repositories
BrainGNN_Pytorch
A preliminary implementation of BrainGNN
Applied-Machine-Learning-Explainability-Techniques
Applied Machine Learning Explainability Techniques, published by Packt
bids-starter-kit
Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets
brainsmash
Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity
CCS
Connectome Computation System
dHCP_template_alignment
script necessary for aligning surfaces (derived from the dHCP structural pipeline) to the dHCP surface template space
GAT
Graph Attention Networks (https://arxiv.org/abs/1710.10903)
GraphSAGE
Representation learning on large graphs using stochastic graph convolutions.
HCPpipelines
Processing pipelines for the HCP
heudiconv
A flexible DICOM converter for organizing brain imaging data into structured directory layouts
Ladwig_2022_Events_Static_FC
Files associated with Ladwig et al. on relationship between high cofluctuation BOLD events and static FC.
matlab-barplot
Automatic bar & violin plots with groups, whiskers, significance bridges
micapipe
micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below
neuromaps
A toolbox for comparing brain maps
plotSurfaceROIBoundary
Plot the boundaries of ROIs on a surface
pumpkin-book
《机器学习》（西瓜书）公式推导解析，在线阅读地址：https://datawhalechina.github.io/pumpkin-book
PyTorch-GAN
PyTorch implementations of Generative Adversarial Networks.
ramp-workflow
Toolkit for building predictive workflows on top of pydata (pandas, scikit-learn, pytorch, keras, etc.).
rotate_parcellation
Code (in Matlab and R) to perform a spherical rotation (permutation) of a parcellated cortical map.
SAGPool
Official PyTorch Implementation of SAGPool - ICML 2019
stagin
STAGIN: Spatio-Temporal Attention Graph Isomorphism Network
tda-msc-rsfMRI
Code for analyzing MSC rsfMRI data using TDA
text_classification
使用rnn,lstm,gru,fasttext,textcnn,dpcnn,rnn-att,lstm-att,兼容huggleface/transformers，以及以transforemrs作为词嵌入模型，后面接入cnn、rnn、attention等等做文本分类。以及各个模型的对比
thalamocortical_gradients
In this project, gradients of thalamo-cortical functional connectivity were computed in individuals with Autism Spectrum Disorder (ASD) and typically developing individuals