Beast code in Giters

Daniel Zerbino's repositories

velvet

Short read de novo assembler using de Bruijn graphs, as published in: D.R. Zerbino and E. Birney. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Research, 18: 821-829

Language:CGPL-2.0278 29 37

ascii_plots

Convenience function for quick and dirty data analysis

Language:Python68 8 3

oases

De novo transcriptome assembler for short reads

Language:CGPL-3.061 9 21

WiggleTools

Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency

Language:C9 10

pyAVG

AVG sampler prototype

Language:Python5 60

cn-avg

Copy Number AVG pipeline for the analysis of NGS Cancer data

Language:PythonNOASSERTION3 30

QuantumPong

Pong with Quantum mechanics

Language:JavaScript1 10