dvklopfenstein

DV Klopfenstein, PhD's starred repositories

interviews

Everything you need to know to get the job.

Language:JavaMIT62462 2608 53

wtfpython

What the f*ck Python? 😱

Language:PythonWTFPL35281 750 195

awesome-falsehood

😱 Falsehoods Programmers Believe in

CC0-1.023252 375 29

opensource.guide

📚 Community guides for open source creators

Language:HTMLCC-BY-4.013694 12720

PySyft

Perform data science on data that remains in someone else's server

Language:PythonApache-2.09317 198 3387

python-docx

Create and modify Word documents with Python

Language:PythonMIT4292 147 1194

choosealicense.com

A site to provide non-judgmental guidance on choosing a license for your open source project

Language:RubyMIT3591 475 335

oneliners

Useful bash one-liners for bioinformatics.

1810 157 10

hardware_introduction

What scientific programmers must know about CPUs and RAM to write fast code.

Language:Julia425 19 3

tetris

My rendition of the classic tetris for terminal.

Language:C++MIT358 5 9

octopus

Bayesian haplotype-based mutation calling

Language:C++MIT298 19 265

deep-molecular-optimization

Molecular optimization by capturing chemist’s intuition using the Seq2Seq with attention and the Transformer

Language:PythonApache-2.0139 70

Early-Vote-2020G

Tracker for 2020 general election early vote (mail and in-person) activity

Language:R109 9 16

pdftools

small collection of python scripts for pdf manipulation

Language:PythonMIT92 5 12

coolpuppy

A versatile tool to perform pile-up analysis on Hi-C data in .cool format.

Language:PythonMIT72 6 102

ascii_plots

Convenience function for quick and dirty data analysis

Language:Python68 8 3

districtbuilder

DistrictBuilder is web-based, open source software for collaborative redistricting.

Language:TypeScriptApache-2.063 10 714

allhic

Genome scaffolding based on HiC data in heterozygous and high ploidy genomes

Language:Jupyter NotebookBSD-3-Clause58 40

treecut

Find nodes in hierarchical clustering that are statistically significant

Language:Python28 2 3

pyfrost

Python bindings for Bifrost with a NetworkX compatible API

Language:PythonBSD-3-Clause25 13 7

fypo

Fission Yeast Phenotype Ontology

Language:MakefileCC-BY-4.014 4 4325

biomedicalresearch2021

Course Materials for EN.601.452 / AS.020.415 Computational Biomedical Research & Advanced Biomedical Research

CC0-1.013 30

pyMutF

A project to find the mutations relevant to HIV binding events.

Language:Python900

RawBodyBugg

A collection of scripts for managing data from a BodyBugg

Language:Python900

practises

Notes on Knocean Practises

Language:Nix8 40

flELM

A project to find the source-organism of a flu sequence based on the specificity of functional sites.

Language:Python5 3 1

judosite

A django-based judo attendance website

Language:JavaScript5 40

Drexel-SDP

A code repository for a Drexel Senior Design Project

Language:Objective-C400

publookup

A python function for looking up Pubmed articles based on the genes that they mention

Language:Python400

htguideseq

High Throughput GuideSeq Analysis

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