duancaohui

jCAN

Joint Cross-Attention Network with Deep Modality Prior for Fast MRI Reconstruction

WTRN-TIP

MTTU-Net

medSynthesisV1

This is a copy of package for medical image synthesis work with LRes-ResUnet and GAN (wgan-gp) in pytorch framework

SynGAN

SynGAN: a generative adversarial network to generate synthetic 7T images from the widely used 3T images

synthFLAIR

Synthetic FLAIR generation software

SpatialAlignmentNetwork

code for Multi-Modal MRI Reconstruction Assisted with Spatial Alignment Network

fastmri-reproducible-benchmark

Try several methods for MRI reconstruction on the fastmri dataset. Home to the XPDNet, runner-up of the 2020 fastMRI challenge.

Awesome-MRI-Reconstruction

CRNN-MRI

[TMI'19] Convolutional Recurrent Neural Networks for Dynamic MR Image Reconstruction

MPRNet

[CVPR 2021] Multi-Stage Progressive Image Restoration. SOTA results for Image deblurring, deraining, and denoising.

Reg-GAN

WATNet

Implementation for paper "Synthesized 7T MRI from 3T MRI via deep learning in spatial and wavelet domains" in Medical Image Analysis

DeepSeg

DeepSeg: Deep Neural Network Framework for Automatic Brain Tumor Segmentation using Magnetic Resonance FLAIR Images

DuDoRNet

DuDoRNet: Learning a Dual-Domain Recurrent Network for Fast MRI Reconstruction with Deep T1 Prior (CVPR 2020)

super-resolution

Tensorflow 2.x based implementation of EDSR, WDSR and SRGAN for single image super-resolution

bart

BART: Toolbox for Computational Magnetic Resonance Imaging

Unpaired-GANCS

This code implements the recovery of image x from the undersampled measurements y when the pair (x,y) is not avaialble for training. However, we know the images, say \tilde{x}, from another relevant image dataset that can guide us to recover the ground-truth x from y. This is important for medical imaging applications where usually one doesn't have access to high-resolution datastes for all organs.

sepia

Matlab GUI pipeline application for quantitative susceptibility mapping (QSM)

CLEARSWI.jl

improved susceptibility weighted imaging using multi-echo aquisitions

deep-complex-convolutional-network

Complex Convolutional Neural Network (UNet) for Magnetic Reasonance Imaging (MRI) reconstruction

Subsampled-Brain-MRI-Reconstruction-by-Generative-Adversarial-Neural-Networks

dl-cs

Compressed Sensing: From Research to Clinical Practice with Data-Driven Learning

complex-networks-release

Implementation related to the paper "Analysis of deep complex-valued convolutional neural networks for MRI reconstruction and phase-focused applications" by Elizabeth K. Cole et. al; Toolbox for complex-valued convolution and activation functions using an unrolled architecture.

QSM

Hongfu Sun's MATLAB codes for QSM reconstruction pipeline.

MRI-reconstruction-using-Resnet-with-data-consistency-layer

Here I implement Resnet with data-consistency layer for MRI reconstruction using tensorflow 2.0 style

SP3

A 3D extension of the SPIRiT image reconstruction method

DPABI

DPABI: a toolbox for Data Processing & Analysis of Brain Imaging

ExploreASL

ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.mutsaerts@amsterdamumc.nl. Development details can be found under the wiki tab. Code documentation can be found on the documentation website https://exploreasl.github.io/Documentation

k-space-deep-learning

k-Space Deep Learning for Accelerated MRI