dtm2451

dittoSeq

Color blindness friendly visualization of single-cell and bulk RNA-sequencing data

ProgressiveHematopoiesis

Code to go along with a manuscript: Bunis, et. al., Cell Reports, 2021.

dittoViz

Color blindness friendly visualization of any data in a data.frame format. Like dittoSeq, but not omics-structure restricted

RNAseqPlotR

A set of functions built for analysis and visualization (color blindness friendly) of single-cell and bulk RNA-sequencing data

EndometrialDeconvolution

Code to go along with a manuscript in press

WIP-vignettes

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

BiocStickers

Stickers for some Bioconductor packages - feel free to contribute and/or modify.

ComplexHeatmap

Make Complex Heatmaps

SCEGallery

Pretty plotting for SCE objects.

scRNAseq

Clone of the Bioconductor repository for the scRNAseq package.

seurat

R toolkit for single cell genomics

SingleR

Clone of the Bioconductor repository for the SingleR package.

SingleR-1

SingleR: Single-cell RNA-seq cell types Recognition (legacy version)