dswatson

bioplotr

Pretty, simple, optionally interactive plots for bioinformatics analysis pipelines

foundations_of_sds

HackMD scripts for tutorial sessions

digital_graveyard

cbl

Counder blanket learner for causal discovery

arf

Adversarial random forests for density estimation and generative modeling

biomisc

Miscellaneous wrappers and functions for biostatistical things

eForest

Implements Feng & Zhou's autoencoder by forest algorithm.

election_simulator

leakyIV

Bounding causal effects with leaky instruments

AAAS

Analysis scripts for AAAS study

Affective_Polarisation

Data cleaning and analysis scripts for project on affective polarisation in the UK

cpi_paper

Experiments in conditional predictive impact

crl

Contrastive regime learning

Crohns

Scripts and results for study on Crohn's disease

dissertation

Code for reproducing results and figures from my DPhil thesis

dplyr

dplyr: A grammar of data manipulation

dswatson.github.io

Source code for dswatson.github.io

edge_cases

epistemic_agents

Experiments in epistemic agency

gfire

Generalized forest integration and regression ensemble algorithm for causal network inference

grn

Adventures in gene regulatory network inference

hdmx

A hypothesis testing framework for high-dimensional model explanation

kernelshap

Implementation of Kernel SHAP

local

Experiments in local inference for conditional predictive impact

logical_xai

PCC

Scripts and results for pheochromocytoma study.

projectr

A unified grammar of graphics framework for plotting low-dimensional projections of high-dimensional data

rational_shapley

Shapley values for utility maximizing agents

smoothFDR

An empirical Bayes method for exploiting spatial structure in large multiple-testing problems

soft_instruments

Estimating causal effects with soft instruments