drychkov

Kidney_hSTA_subphenotyping

PA_in_RA

Physical Activity in Rheumatoid Arthritis

ABMR-TCMR_biomarkers

BigData_AI_DrugDiscovery

A collection of resources useful for leveraging big data and AI for drug discovery. It mainly serves as an orientation for new lab folks.

ChIP-seq-analysis

ChIP-seq analysis notes from Ming Tang

CKG

Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported from diverse biomedical databases 2) automate knowledge discovery making use of all the information contained in the graph

DAT3

General Assembly's Data Science course in Washington, DC

Data_Incubator_15

Summer 2015

feseR

feseR: Combining feature selection methods for analyzing omics data

RA_biomarkers

Data_Incubator_16

Spring 2016

datasciencecoursera

for the assignment #1

dl_tutor

ds30

Data Science in 30 Minutes

ds30_3

Data Science in 30 Minutes #3 - Holt-Winters and exponential smoothing

flask-demo

Basic template for using Flask on Heroku

GettingAndCleaningData

Course project

HCC_NEN

liver cancer project

health-analytics-ucsf

This is a repository for a seminar series conducted at UCSF in April 2017 by Prof. Arash Nourian.

httr

httr: a friendly http package for R

Kaggle-Ensemble-Guide

Code for the Kaggle Ensembling Guide Article on MLWave

Machine-Learning-in-R

4-hour tutorial on machine learning in R: knn, OLS, decision trees, random forest, gbm, superlearner

ml_cheat_sheet

My notes and superstitions about common machine learning algorithms

ProgrammingAssignment2

Repository for Programming Assignment 2 for R Programming on Coursera

Recon2Neo4j

This framework is part of the DiseaseNetworks module, eTRIKS Lab. The Metabolic Framework uses the neo4j graph platform for the management of data on human metabolism (basis: Recon2).

RGES

reverse gene expression score

sirota_lab_covid_drug_repositioning

Drug repositioning pipeline applying a rank-based metric to transcriptomics data to identify potential therapeutics for COVID-19

SPOKE_NASA

SPOKEsig-Workshop

Springleaf

Code example from the Springleaf competition project