Venkatesh Chellappa's repositories
awesome-notebooks
A powerful data & AI notebook templates catalog: prompts, plugins, models, workflow automation, analytics, code snippets - following the IMO framework to be searchable and reusable in any context.
bioinformatics-open-course
:microscope: Path to a free self-taught education in Bioinformatics!
gatk_basic
A very simple and basic shell script to run GATK best practice pipeline
5pillars
Five pillars of computational reproducibility
autoseq-doc
Documentation for autoseq pipelines and dependencies
autoseq-scripts
Helper scripts for autoseq
coding-interview-university
A complete computer science study plan to become a software engineer.
gatk3-4-rnaseq-germline-snps-indels
Workflows for processing RNA data for germline short variant discovery with GATK (v3+v4) and related tools
GFFtoolkit
Extracts information from GFF and prepare them in bed format
probiowebpage
Web page files for Probio
ProVision
Shiny app for proteomics data analysis
python-cheatsheet
Comprehensive Python Cheatsheet
sketch-threejs
Interactive sketches made with three.js.
SparkGC
Spark Based Genome Compression for Large Collections of Genomes
Spring-data-compression
FASTQ compression
yapf
A formatter for Python files