drugilsberg

paccmann

PaccMann training models

interact

Implementation of the INtERAcT algorithm

genenetweaver

Python wrapper for GeneNetWeaver

bootstrap_python_package

Bootstrap a python package with cookiecutter

chimaera

Implementation of the Chimaera algorithm

docker-rdkit-ubuntu

A docker image containing a "lightweight" RDKit installation

uniprot_fasta_parser

UniProt FASTA parser

tensorflow-estimator-serving

Example of how to use tensorflow serving with an estimator

biomedical

Tools for curating biomedical training data for large-scale language modeling

container-service-getting-started-wt

data-tooling

How should we store and serve the dataset?

datasets

🤗 The largest hub of ready-to-use NLP datasets for ML models with fast, easy-to-use and efficient data manipulation tools

docker

Dockerfiles and configuration scripts for the Docker Hub Official Couchbase images

drugilsberg.github.io

Personal web page

esm

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

fms-sdg

Synthetic Data Generation for Foundation Models

fvcore-master-for-textfusenet

fvcore master for TextFuseNet

git-lfs

Git extension for versioning large files

gt4sd-core

GT4SD, an open-source library to accelerate hypothesis generation in the scientific discovery process.

histocartography

Histocartography is a framework bringing together AI and Digital Pathology

instructlab

Command-line interface. Use this to chat with the model or train the model (training consumes the taxonomy data)

Mastodon-Cheminformaticians

Most simple DIY webapp to bulk follow cheminformatics accounts on Mastodon. By Daniel Probst forked from David Adler, Thomas Haase & Hendrik Erz.

mhdorientation

A repository cointaining a code to convert the orientation to the RAS space in .mhd files

models

Models and examples built with TensorFlow

paired-words-dnn-classifier

paperscraper

Tools to scrape publication metadata from pubmed, arxiv, medrxiv and chemrxiv.

phd_thesis_markdown

Template for writing a PhD thesis in Markdown

promptsource

Toolkit for collecting and applying templates of prompting instances

TextFuseNet

A PyTorch implementation of "TextFuseNet: Scene Text Detection with Richer Fused Features".

transformers

🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.