Harshil Patel's repositories
webinarpipeline
Please don't break!!
nf-core-atacseq
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nf-core-modules
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nf-core-sarek
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nf-core-scrnaseq
A single-cell RNAseq pipeline for 10X genomics data
nf-symlinks
POC repo to test NF behaviour with symlinks
abhi18av-nf-gwas
A nextflow pipeline to perform genome-wide association studies using regenie.
nf-core-chipseq
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nf-core-fetchngs
Pipeline to fetch metadata and raw FastQ files from public databases
nf-core-imcyto
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nf-core-rnaseq
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nf-core-viralrecon
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COSMO
COSMO: COrrection of Sample Mislabeling by Omics
custompipeline
Pipeline with custom nf-core pipeline template
esha-showcase
Infrastructure as code implementation of the seqeralabs/showcase Workspace in Tower Cloud
multi-package-containers
Testing building mulled containers for multi-requirement tools.
nextflow-io-rnaseq-nf
A proof of concept of RNAseq pipeline
nextflowio-hello
Classic hello world script in Nextflow language
nf-core-configs
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nf-core-cutandrun
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nf-core-demultiplex
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nf-core-nf-co.re
Files for the main nf-core website >>>
nf-core-proteinfold
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nf-core-smrnaseq
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nf-core-test-datasets
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nf-core-tools
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nf-test
dummy workflow
nf-tests
Repo to test NF / Tower code