drneavin's repositories
DoubletDecon
A tool for removing doublets from single-cell RNA-seq data
Language:R000
Folder-Structure-Conventions
Folder / directory structure options and naming conventions for software projects
MIT000
Monopogen
Single Cell Population Genetics and Association Analysis Tool
Language:Python000
sceQTL-Gen-Consortium-Demultiplexing
Results from testing SNP-based demultiplexing methods on multiple independent data sets.
scrunchy
R toolkit for the analysis of single-cell functional heterogeneity
Language:RNOASSERTION000
umap
Uniform Manifold Approximation and Projection
Language:PythonBSD-3-Clause000
vices
VICES (Verify Intensity Contamination from Estimated Sources) is a program that jointly estimates contamination and its sources in genotyping arrays.
Language:C++000
WG1-pipeline-QC_GoogleCloud
Part of the sc-eQTLgen consortium pipeline. Step 1, where the QC is done. For Google Cloud Execution
Language:Python000
WG2-pipeline-classification-docs
WG2 documentation website for cell type classification
Language:HTML000