sacha schutz's repositories
snp_location
testing where SNP are in the humain genom
Annso
Variant filter and annotator REST service
AppImageKit
Using AppImageKit you can package desktop applications as AppImages that run on common Linux-based operating systems, such as RHEL, CentOS, Ubuntu, Fedora, debian and derivatives.
codon_biais
compute codon biais in human genom
dna_chaos_game
Display chaos game from fasta file
EG_MinION_2016
Edinburgh Genomics MinION training 2016
exome
exome pipeline made with snakemake
flasky
Companion code to my O'Reilly book "Flask Web Development".
gene_panel
gene panel used in diagnosis
hgvs_to_genomics
Convert hgvs snp (only) to genomics coordinate
Hugodims-pipeline
Source code of the pipeline for the Hugodims project.
pipelines
bioinformatics pipeline made with Snakemake
POGG_poster
Poster used for POGG presentation, from Thibault Etienne work
speedseq
A flexible framework for rapid genome analysis and interpretation
sqlitebrowser
Official home of the DB Browser for SQLite (DB4S) project. Previously known as "SQLite Database Browser" and "Database Browser for SQLite". Website at:
tupi
Tupi: 2D Magic
V-pipe
V-pipe is a pipeline designed for analysing NGS data of short viral genomes
wingo-client
wingo client
wingo-server
wingo server
wtools
a REST API based on variant_tools
wtools-client
Qt client for wtools