Christian Lee's repositories
open-field-analysis
Scripts to segment and track rodents in an open field.
pupil-analysis
Measure pupil diameter from frames in a series of tiff stacks.
transgenic-pupil
A method for segmentation and measurement of mouse pupil from video sequences.
GC6-wf
Scripts for extraction and analysis of widefield calcium data from awake behaving mice.
Language:MATLAB000
prominence-plots
Scripts to create prominence plots from widefield calcium imaging data. Steinmetz et al., 2017 eneuro
Language:MATLAB000
synaptic-analysis
Scripts to generate bar graphs and statistically compare data.
Language:MATLAB000