Doug Shepherd's repositories
Language:Python000
GeoMXprocessing
Code to extract ROIs from Nanostring GeoMX OME-TIFF
Language:Jupyter NotebookMIT000
npy2bdv
Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
Language:PythonGPL-3.0000
OpenMicroscopy
Non-comprehensive list of projects and resources related to open microscopy.
NOASSERTION000
PHY333_S2022
iPython notebooks for PHY333 Spring 2021
Language:Jupyter NotebookGPL-3.0000
PHY333_S2024
Fitting codes for Spring 2024 PHY 333: Electronics
Language:Jupyter NotebookMIT000
PHY452_F2023
Google Colab notebooks for PHY452 Optics Fall 2023
Language:Jupyter NotebookMIT000
pycro-manager
Python control of micro-manager for customized data acquisition
Language:PythonBSD-3-Clause000
Language:Jupyter Notebook000
spatial
All thing spatial, from MERFISH, to histology
Language:Jupyter NotebookMIT000