dozy / npg_qc

QC checks and metrics for Illumina NGS data

QC Checks and Metrics for Illumina Next Generation Sequencing Data
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lib directory:
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 npg_qc::Schema namespace - DBIx db binding
 npg_qc::view, npg_qc::model and npg_qc::util namespaces -
     a web application rendering Illumina QC metrics
 npg_qc::illumina - db loaders for Illumina QC metrics
 npg_qc::autoqc namespace - WTSI core sequencing pipeline inhouse
     QC checks and storage of QC results

bin directory:
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 perl scripts

cgi-bin directory:
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 cgi script for the web app

scripts directory:
------------------
 supplimentary scripts

src directory:
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 source code for C utilities

htdocs directory:
-----------------
 client-side scripts for the web app

data directory:
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 templates for the web app
 db config file for the web app
 db schema dump

t directory:
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 tests
 test data
 supplimentary scripts and modules for testing