douym

MosaicForecast

A mosaicSNV detecting software based on phasing and random forest

bsmn-pipeline

BSMN common data processing pipeline

coursera_Rprogramming

a web course

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

HipSTR

Genotype and phase short tandem repeats using Illumina whole-genome sequencing data

InteractiveLogisticRegression

Interactive visualization of non-linear logistic regression decision boundaries

mosaic-from-barcodes

Detect mosaic variants using barcode information

MosaicForecast-1

A mosaic detecting software based on phasing and random forest

MosaicHunter

A tool to detect postzygotic single-nucleotide mosaicism from unpaired, trio, or paired samples.

MosaicPC

mxnet-the-straight-dope

An interactive book on deep learning. Much easy, so MXNet. Wow.

mypackage

picard

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

ProgrammingAssignment2

Repository for Programming Assignment 2 for R Programming on Coursera

pydata-book

Materials and IPython notebooks for "Python for Data Analysis" by Wes McKinney, published by O'Reilly Media

r-mac

Rgit

seqpipe

A framework for SEQuencing data analysis PIPElines.

shiny_kmeans_tutorial

Reproduce the k-means shiny example with step-by-step examples.

tools