Donovan H. Parks's repositories
Background-Subtraction-Library
C++ background substraction library
GenomeTreeTk
A toolbox for working with genome trees.
ExpressBetaDiversity
Taxon- and phylogenetic-based beta diversity measures.
FragmentClassificationPackage
Homology- and composition-based classifiers for assigning a taxonomic attribution to metagenomic fragments.
GeneTreeTk
A toolbox for working with gene trees.
CommunityM
Identify, classify, and assemble 16S reads in metagenomic data.
advent-of-code
Solutions for Advent of Code
Language:PythonGPL-3.0000
finch-rs
A genomic minhashing implementation in Rust
Language:RustMIT000
math-as-code
a cheat-sheet for mathematical notation in code form
vega_templates
Python templates for creating visualizations using the Vega visualization grammar
GPL-3.0000