Luis Tovar's starred repositories
eggnog-mapper
Fast genome-wide functional annotation through orthology assignment
AdapterRemoval
This program was developed to remove residual adapter sequences from next generation sequencing reads. The program handles both single end and paired end data.
fasta_utilities
A collection of scripts developed to interact with fasta, fastq and sam/bam files.
Phinch
Phinch is an open-source framework for visualizing biological data, funded by a grant from the Alfred P. Sloan foundation. This project represents an interdisciplinary collaboration between Pitch Interactive, a data visualization studio in Oakland, CA, and biological researchers at UC Riverside.
RAPSearch2
Reduced Alphabet based Protein similarity Search
literate-resting
Scripts and code for development of literate testing with reST-based shell tutorials.