dongspy's repositories

pydong

pidong's python toolbox

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GIFT

GIFT(Google Imapact Factor Tools) - Chrome/Edge plugin to get the Google Scholar Impact Factor

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legoseq

Manipulating sequencing data is like playing with LEGO bricks.

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LynxAligner

LynxAligner, is a sequence alignment software developed using Rust and the seed-extend algorithm

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legoseq-js

the front-end application of LegoSeq

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NGmergers

Rust wrapper of the NGmerge(https://github.com/harvardinformatics/NGmerge) api

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react-wasm-template

using react import the wasm function compiled by rust

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reportly

An Open Source Python Report Engine for Data Visualization with HTML

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AccuraCode

AccuraCode® analysis pipeline

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bonito

A PyTorch Basecaller for Oxford Nanopore Reads

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candle-esm

Evolutionary Scale Modeling (esm) Implemented Using Rust Candle.

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cellranger

10x Genomics Single Cell Analysis

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enclone

VDJ Clonotyping & Analysis Tools

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enclone_ranger

Core components for enclone

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evolocity

Evolutionary velocity with protein language models

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fastq_pair

FASTQ pairing algorithms written in Rust

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lightning-hydra-template

PyTorch Lightning + Hydra. A very user-friendly template for ML experimentation. ⚡🔥⚡

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myocardial-remodelling

HCM and HF code

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polars

Dataframes powered by a multithreaded, vectorized query engine, written in Rust

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ProteinMPNN

Code for the ProteinMPNN paper

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pyssw

Python interface for SIMD Smith-Waterman Library

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react-todo

react-todo

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rust-companies

A list of companies using Rust in production.

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rust-toolbox

Rust utility code

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scan-rs

Single-cell analysis methods in Rust

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scvi-tutorials

Notebooks used in scvi-tools tutorials(源码解读)

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wdlang

A web front-end for the Cromwell job server based on the React

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