dokato / connectivipy

python module for connectivity analysis

ConnectiviPy

Python module for connectivity analysis. You may find here implementation of MVAR based estimators like DTF, PDC and also Coherency, PSI. For more information visit documentation page.

The project was supported by Google Summer of Code 2015 and done in collaboration with International Neuroinformatics Coordination Facility.

Content

• Data - data object that makes data handling easier
• Connectivity - class with connectivity estimators
• Mvar fitting - this submodule includes some MVAR algorithms

License

BSD 2-clause

Documentation

Visit ReadTheDocs for detailed documentation and tutorials.

Installation

Option 1: PIP (stable release)

pip install connectivipy

Option 1: PIP+GIT (latest release)

pip install git+https://github.com/dokato/connectivipy.git

Option 3: using GIT (the most recent version)

git clone https://github.com/dokato/connectivipy.git
cd connectivipy
python setup.py install

Authors

• Dominik Krzemiński
• Maciej Kamiński (scientific lead)