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Derek Nedveck (dnedveck)

dnedveck

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Derek Nedveck's starred repositories

awesome

😎 Awesome lists about all kinds of interesting topics

License:CC0-1.0Stargazers:317528Issues:7739Issues:338

hacker-laws

💻📖 Laws, Theories, Principles and Patterns that developers will find useful. #hackerlaws

Language:ShellLicense:CC-BY-SA-4.0Stargazers:25694Issues:443Issues:204

vim-galore

:mortar_board: All things Vim!

Language:Vim ScriptLicense:CC-BY-SA-4.0Stargazers:16633Issues:322Issues:94

treesheets

TreeSheets : Free Form Data Organizer (see strlen.com/treesheets)

Language:C++License:ZlibStargazers:2515Issues:61Issues:279

statrethinking_winter2019

Statistical Rethinking course at MPI-EVA from Dec 2018 through Feb 2019

Stargazers:2016Issues:173Issues:36

zk

A plain text note-taking assistant

Language:GoLicense:GPL-3.0Stargazers:1567Issues:16Issues:178

hugo-bearblog

🧸 A Hugo theme based on »Bear Blog«. Free, no-nonsense, super-fast blogging. This theme now includes a dark color scheme to support dark mode 🦉 ⬛️!

Language:HTMLLicense:MITStargazers:824Issues:10Issues:42

infra

99.8% less leaked credentials

Language:JinjaLicense:GPL-3.0Stargazers:704Issues:29Issues:8

gggenes

➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2

Language:RStargazers:482Issues:6Issues:76

arrows

JavaScript library for drawing diagrams of small graphs, using D3 to generate SVG. Useful for explaining Neo4j graph modelling concepts in presentations and blogs.

Language:HTMLStargazers:349Issues:35Issues:20

hamster-system

Ultra-simple framework to organize your life.

Stargazers:320Issues:8Issues:0

datamodelr

Data model diagrams in R

Language:RLicense:NOASSERTIONStargazers:283Issues:12Issues:21

flowcraft

FlowCraft: a component-based pipeline composer for omics analysis using Nextflow. :whale::package:

Language:PythonLicense:GPL-3.0Stargazers:240Issues:18Issues:104

awesome-vdj

📚 Tools and databases for analyzing HLA and VDJ genes.

License:CC0-1.0Stargazers:194Issues:14Issues:2

blobtools

Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets

Language:PythonLicense:GPL-3.0Stargazers:180Issues:9Issues:102

rmonad

Pipelines you can compute on

Language:RStargazers:70Issues:7Issues:16

keg

Language:GoLicense:Apache-2.0Stargazers:36Issues:2Issues:123

TCRMatch

Language:C++License:NOASSERTIONStargazers:25Issues:9Issues:42

data-design-patterns

Reproducible and reusable patterns for structuring data projects in R.

Language:RStargazers:23Issues:0Issues:0

keg-spec

Knowledge Exchange Graph (KEG) 2023-01 Specification

Language:GoLicense:CC0-1.0Stargazers:19Issues:5Issues:57

rhmmer

Simple R utilities for working with HMMER

Language:RLicense:MITStargazers:18Issues:4Issues:5

budgetr

Easy budgeting in R

Language:RLicense:GPL-3.0Stargazers:16Issues:2Issues:37

ODG

ODG: Omics Database Generator - Integration toolkit for -omics data

Language:ClojureLicense:GPL-3.0Stargazers:8Issues:4Issues:0

madpy-numba

Materials for Numba Madpy talk

Language:Jupyter NotebookLicense:MITStargazers:6Issues:3Issues:0

gfftk

GFF toolkit

Language:PythonLicense:BSD-2-ClauseStargazers:5Issues:2Issues:3

Bter_neonicotinoid_exposure_experiment

Caste- and pesticide-specific effects of neonicotinoid pesticide exposure on gene expression in bumblebees

Language:RLicense:GPL-3.0Stargazers:5Issues:8Issues:0

last-fm-tools

Language:GoLicense:Apache-2.0Stargazers:2Issues:3Issues:0

useful-nextflow-patterns

Useful nextflow patterns and examples

Language:NextflowStargazers:2Issues:4Issues:0

bacteria-bowtie

Simple bioinformatics pipeline to align / count RNA reads to a bacterial genome with bowtie2 / cuffnorm and cuffquant

Language:RLicense:GPL-3.0Stargazers:1Issues:0Issues:0

data-design-patterns

Reproducible and reusable patterns for structuring data projects in R.

Language:HTMLStargazers:1Issues:3Issues:0