Course objective: to learn current best practices in biofinformatics workflow/pipeline development.
- containerization with Docker and Singularity -- how to take a simple workflow and containerize it?
- pipeline development with nextflow
- reproducible research workflows using nextflow
- work: scratch directory where I'm working through stuff. This is where I'm learning how to make sausage.
- assets: pdfs, html files, content to be referenced during learning from either work, or in the readers
- readers: more polished things to describe certain aspects of what I learned